Update to 2.0.0 tree from current Fremantle build
[opencv] / ml / src / _ml.h
diff --git a/ml/src/_ml.h b/ml/src/_ml.h
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-/*M///////////////////////////////////////////////////////////////////////////////////////
-//
-//  IMPORTANT: READ BEFORE DOWNLOADING, COPYING, INSTALLING OR USING.
-//
-//  By downloading, copying, installing or using the software you agree to this license.
-//  If you do not agree to this license, do not download, install,
-//  copy or use the software.
-//
-//
-//                        Intel License Agreement
-//
-// Copyright (C) 2000, Intel Corporation, all rights reserved.
-// Third party copyrights are property of their respective owners.
-//
-// Redistribution and use in source and binary forms, with or without modification,
-// are permitted provided that the following conditions are met:
-//
-//   * Redistribution's of source code must retain the above copyright notice,
-//     this list of conditions and the following disclaimer.
-//
-//   * Redistribution's in binary form must reproduce the above copyright notice,
-//     this list of conditions and the following disclaimer in the documentation
-//     and/or other materials provided with the distribution.
-//
-//   * The name of Intel Corporation may not be used to endorse or promote products
-//     derived from this software without specific prior written permission.
-//
-// This software is provided by the copyright holders and contributors "as is" and
-// any express or implied warranties, including, but not limited to, the implied
-// warranties of merchantability and fitness for a particular purpose are disclaimed.
-// In no event shall the Intel Corporation or contributors be liable for any direct,
-// indirect, incidental, special, exemplary, or consequential damages
-// (including, but not limited to, procurement of substitute goods or services;
-// loss of use, data, or profits; or business interruption) however caused
-// and on any theory of liability, whether in contract, strict liability,
-// or tort (including negligence or otherwise) arising in any way out of
-// the use of this software, even if advised of the possibility of such damage.
-//
-//M*/
-
-#ifndef __ML_INTERNAL_H__
-#define __ML_INTERNAL_H__
-
-#if _MSC_VER >= 1200
-#pragma warning( disable: 4514 4710 4711 4710 )
-#endif
-
-#include "ml.h"
-#include "cxmisc.h"
-
-#include <assert.h>
-#include <float.h>
-#include <limits.h>
-#include <math.h>
-#include <stdlib.h>
-#include <stdio.h>
-#include <string.h>
-#include <time.h>
-
-#ifndef FALSE
-#define FALSE 0
-#endif
-#ifndef TRUE
-#define TRUE 1
-#endif
-
-#define ML_IMPL CV_IMPL
-
-#define CV_MAT_ELEM_FLAG( mat, type, comp, vect, tflag )    \
-    (( tflag == CV_ROW_SAMPLE )                             \
-    ? (CV_MAT_ELEM( mat, type, comp, vect ))                \
-    : (CV_MAT_ELEM( mat, type, vect, comp )))
-
-/* Convert matrix to vector */
-#define ICV_MAT2VEC( mat, vdata, vstep, num )      \
-    if( MIN( (mat).rows, (mat).cols ) != 1 )       \
-        CV_ERROR( CV_StsBadArg, "" );              \
-    (vdata) = ((mat).data.ptr);                    \
-    if( (mat).rows == 1 )                          \
-    {                                              \
-        (vstep) = CV_ELEM_SIZE( (mat).type );      \
-        (num) = (mat).cols;                        \
-    }                                              \
-    else                                           \
-    {                                              \
-        (vstep) = (mat).step;                      \
-        (num) = (mat).rows;                        \
-    }
-
-/* get raw data */
-#define ICV_RAWDATA( mat, flags, rdata, sstep, cstep, m, n )         \
-    (rdata) = (mat).data.ptr;                                        \
-    if( CV_IS_ROW_SAMPLE( flags ) )                                  \
-    {                                                                \
-        (sstep) = (mat).step;                                        \
-        (cstep) = CV_ELEM_SIZE( (mat).type );                        \
-        (m) = (mat).rows;                                            \
-        (n) = (mat).cols;                                            \
-    }                                                                \
-    else                                                             \
-    {                                                                \
-        (cstep) = (mat).step;                                        \
-        (sstep) = CV_ELEM_SIZE( (mat).type );                        \
-        (n) = (mat).rows;                                            \
-        (m) = (mat).cols;                                            \
-    }
-
-#define ICV_IS_MAT_OF_TYPE( mat, mat_type) \
-    (CV_IS_MAT( mat ) && CV_MAT_TYPE( mat->type ) == (mat_type) &&   \
-    (mat)->cols > 0 && (mat)->rows > 0)
-
-/*
-    uchar* data; int sstep, cstep;      - trainData->data
-    uchar* classes; int clstep; int ncl;- trainClasses
-    uchar* tmask; int tmstep; int ntm;  - typeMask
-    uchar* missed;int msstep, mcstep;   -missedMeasurements...
-    int mm, mn;                         == m,n == size,dim
-    uchar* sidx;int sistep;             - sampleIdx
-    uchar* cidx;int cistep;             - compIdx
-    int k, l;                           == n,m == dim,size (length of cidx, sidx)
-    int m, n;                           == size,dim
-*/
-#define ICV_DECLARE_TRAIN_ARGS()                                                    \
-    uchar* data;                                                                    \
-    int sstep, cstep;                                                               \
-    uchar* classes;                                                                 \
-    int clstep;                                                                     \
-    int ncl;                                                                        \
-    uchar* tmask;                                                                   \
-    int tmstep;                                                                     \
-    int ntm;                                                                        \
-    uchar* missed;                                                                  \
-    int msstep, mcstep;                                                             \
-    int mm, mn;                                                                     \
-    uchar* sidx;                                                                    \
-    int sistep;                                                                     \
-    uchar* cidx;                                                                    \
-    int cistep;                                                                     \
-    int k, l;                                                                       \
-    int m, n;                                                                       \
-                                                                                    \
-    data = classes = tmask = missed = sidx = cidx = NULL;                           \
-    sstep = cstep = clstep = ncl = tmstep = ntm = msstep = mcstep = mm = mn = 0;    \
-    sistep = cistep = k = l = m = n = 0;
-
-#define ICV_TRAIN_DATA_REQUIRED( param, flags )                                     \
-    if( !ICV_IS_MAT_OF_TYPE( (param), CV_32FC1 ) )                                  \
-    {                                                                               \
-        CV_ERROR( CV_StsBadArg, "Invalid " #param " parameter" );                   \
-    }                                                                               \
-    else                                                                            \
-    {                                                                               \
-        ICV_RAWDATA( *(param), (flags), data, sstep, cstep, m, n );                 \
-        k = n;                                                                      \
-        l = m;                                                                      \
-    }
-
-#define ICV_TRAIN_CLASSES_REQUIRED( param )                                         \
-    if( !ICV_IS_MAT_OF_TYPE( (param), CV_32FC1 ) )                                  \
-    {                                                                               \
-        CV_ERROR( CV_StsBadArg, "Invalid " #param " parameter" );                   \
-    }                                                                               \
-    else                                                                            \
-    {                                                                               \
-        ICV_MAT2VEC( *(param), classes, clstep, ncl );                              \
-        if( m != ncl )                                                              \
-        {                                                                           \
-            CV_ERROR( CV_StsBadArg, "Unmatched sizes" );                            \
-        }                                                                           \
-    }
-
-#define ICV_ARG_NULL( param )                                                       \
-    if( (param) != NULL )                                                           \
-    {                                                                               \
-        CV_ERROR( CV_StsBadArg, #param " parameter must be NULL" );                 \
-    }
-
-#define ICV_MISSED_MEASUREMENTS_OPTIONAL( param, flags )                            \
-    if( param )                                                                     \
-    {                                                                               \
-        if( !ICV_IS_MAT_OF_TYPE( param, CV_8UC1 ) )                                 \
-        {                                                                           \
-            CV_ERROR( CV_StsBadArg, "Invalid " #param " parameter" );               \
-        }                                                                           \
-        else                                                                        \
-        {                                                                           \
-            ICV_RAWDATA( *(param), (flags), missed, msstep, mcstep, mm, mn );       \
-            if( mm != m || mn != n )                                                \
-            {                                                                       \
-                CV_ERROR( CV_StsBadArg, "Unmatched sizes" );                        \
-            }                                                                       \
-        }                                                                           \
-    }
-
-#define ICV_COMP_IDX_OPTIONAL( param )                                              \
-    if( param )                                                                     \
-    {                                                                               \
-        if( !ICV_IS_MAT_OF_TYPE( param, CV_32SC1 ) )                                \
-        {                                                                           \
-            CV_ERROR( CV_StsBadArg, "Invalid " #param " parameter" );               \
-        }                                                                           \
-        else                                                                        \
-        {                                                                           \
-            ICV_MAT2VEC( *(param), cidx, cistep, k );                               \
-            if( k > n )                                                             \
-                CV_ERROR( CV_StsBadArg, "Invalid " #param " parameter" );           \
-        }                                                                           \
-    }
-
-#define ICV_SAMPLE_IDX_OPTIONAL( param )                                            \
-    if( param )                                                                     \
-    {                                                                               \
-        if( !ICV_IS_MAT_OF_TYPE( param, CV_32SC1 ) )                                \
-        {                                                                           \
-            CV_ERROR( CV_StsBadArg, "Invalid " #param " parameter" );               \
-        }                                                                           \
-        else                                                                        \
-        {                                                                           \
-            ICV_MAT2VEC( *sampleIdx, sidx, sistep, l );                             \
-            if( l > m )                                                             \
-                CV_ERROR( CV_StsBadArg, "Invalid " #param " parameter" );           \
-        }                                                                           \
-    }
-
-/****************************************************************************************/
-#define ICV_CONVERT_FLOAT_ARRAY_TO_MATRICE( array, matrice )        \
-{                                                                   \
-    CvMat a, b;                                                     \
-    int dims = (matrice)->cols;                                     \
-    int nsamples = (matrice)->rows;                                 \
-    int type = CV_MAT_TYPE((matrice)->type);                        \
-    int i, offset = dims;                                           \
-                                                                    \
-    CV_ASSERT( type == CV_32FC1 || type == CV_64FC1 );              \
-    offset *= ((type == CV_32FC1) ? sizeof(float) : sizeof(double));\
-                                                                    \
-    b = cvMat( 1, dims, CV_32FC1 );                                 \
-    cvGetRow( matrice, &a, 0 );                                     \
-    for( i = 0; i < nsamples; i++, a.data.ptr += offset )           \
-    {                                                               \
-        b.data.fl = (float*)array[i];                               \
-        CV_CALL( cvConvert( &b, &a ) );                             \
-    }                                                               \
-}
-
-/****************************************************************************************\
-*                       Auxiliary functions declarations                                 *
-\****************************************************************************************/
-
-/* Generates a set of classes centers in quantity <num_of_clusters> that are generated as
-   uniform random vectors in parallelepiped, where <data> is concentrated. Vectors in
-   <data> should have horizontal orientation. If <centers> != NULL, the function doesn't
-   allocate any memory and stores generated centers in <centers>, returns <centers>.
-   If <centers> == NULL, the function allocates memory and creates the matrice. Centers
-   are supposed to be oriented horizontally. */
-CvMat* icvGenerateRandomClusterCenters( int seed,
-                                        const CvMat* data,
-                                        int num_of_clusters,
-                                        CvMat* centers CV_DEFAULT(0));
-
-/* Fills the <labels> using <probs> by choosing the maximal probability. Outliers are
-   fixed by <oulier_tresh> and have cluster label (-1). Function also controls that there
-   weren't "empty" clusters by filling empty clusters with the maximal probability vector.
-   If probs_sums != NULL, filles it with the sums of probabilities for each sample (it is
-   useful for normalizing probabilities' matrice of FCM) */
-void icvFindClusterLabels( const CvMat* probs, float outlier_thresh, float r,
-                           const CvMat* labels );
-
-typedef struct CvSparseVecElem32f
-{
-    int idx;
-    float val;
-}
-CvSparseVecElem32f;
-
-/* Prepare training data and related parameters */
-#define CV_TRAIN_STATMODEL_DEFRAGMENT_TRAIN_DATA    1
-#define CV_TRAIN_STATMODEL_SAMPLES_AS_ROWS          2
-#define CV_TRAIN_STATMODEL_SAMPLES_AS_COLUMNS       4
-#define CV_TRAIN_STATMODEL_CATEGORICAL_RESPONSE     8
-#define CV_TRAIN_STATMODEL_ORDERED_RESPONSE         16
-#define CV_TRAIN_STATMODEL_RESPONSES_ON_OUTPUT      32
-#define CV_TRAIN_STATMODEL_ALWAYS_COPY_TRAIN_DATA   64
-#define CV_TRAIN_STATMODEL_SPARSE_AS_SPARSE         128
-
-int
-cvPrepareTrainData( const char* /*funcname*/,
-                    const CvMat* train_data, int tflag,
-                    const CvMat* responses, int response_type,
-                    const CvMat* var_idx,
-                    const CvMat* sample_idx,
-                    bool always_copy_data,
-                    const float*** out_train_samples,
-                    int* _sample_count,
-                    int* _var_count,
-                    int* _var_all,
-                    CvMat** out_responses,
-                    CvMat** out_response_map,
-                    CvMat** out_var_idx,
-                    CvMat** out_sample_idx=0 );
-
-void
-cvSortSamplesByClasses( const float** samples, const CvMat* classes, 
-                        int* class_ranges, const uchar** mask CV_DEFAULT(0) );
-
-void 
-cvCombineResponseMaps (CvMat*  _responses,
-                 const CvMat*  old_response_map,
-                       CvMat*  new_response_map,
-                       CvMat** out_response_map);
-
-void
-cvPreparePredictData( const CvArr* sample, int dims_all, const CvMat* comp_idx,
-                      int class_count, const CvMat* prob, float** row_sample,
-                      int as_sparse CV_DEFAULT(0) );
-
-/* copies clustering [or batch "predict"] results
-   (labels and/or centers and/or probs) back to the output arrays */
-void
-cvWritebackLabels( const CvMat* labels, CvMat* dst_labels,
-                   const CvMat* centers, CvMat* dst_centers,
-                   const CvMat* probs, CvMat* dst_probs,
-                   const CvMat* sample_idx, int samples_all,
-                   const CvMat* comp_idx, int dims_all );
-#define cvWritebackResponses cvWritebackLabels
-
-#define XML_FIELD_NAME "_name"
-CvFileNode* icvFileNodeGetChild(CvFileNode* father, const char* name);
-CvFileNode* icvFileNodeGetChildArrayElem(CvFileNode* father, const char* name,int index);
-CvFileNode* icvFileNodeGetNext(CvFileNode* n, const char* name);
-
-
-void cvCheckTrainData( const CvMat* train_data, int tflag,
-                       const CvMat* missing_mask, 
-                       int* var_all, int* sample_all );
-
-CvMat* cvPreprocessIndexArray( const CvMat* idx_arr, int data_arr_size, bool check_for_duplicates=false );
-
-CvMat* cvPreprocessVarType( const CvMat* type_mask, const CvMat* var_idx,
-                            int var_all, int* response_type );
-
-CvMat* cvPreprocessOrderedResponses( const CvMat* responses,
-                const CvMat* sample_idx, int sample_all );
-
-CvMat* cvPreprocessCategoricalResponses( const CvMat* responses,
-                const CvMat* sample_idx, int sample_all,
-                CvMat** out_response_map, CvMat** class_counts=0 );
-
-const float** cvGetTrainSamples( const CvMat* train_data, int tflag,
-                   const CvMat* var_idx, const CvMat* sample_idx,
-                   int* _var_count, int* _sample_count,
-                   bool always_copy_data=false );
-
-#endif /* __ML_H__ */